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{"sheet":"4. KEGG_enrichment","index":0,"n_rows":88,"n_cols":7,"rows_kept":88,"flags":["formulas_cached_only"]}
["TABLE S5. KEGG enrichment analysis of differentially expressed genes between C4 and C3 groups."]
["#Kegg_pathway","ko_id","Cluster_frequency","Genome_frequency","P-value","Corrected_P-value","rich_factor"]
["Flavonoid biosynthesis","ko00941","11 out of 251 4.38247011952191%","51 out of 9044 0.56390977443609%",{"v":1.07836968799013e-07,"d":"1.08E-07"},{"v":9.27397931671514e-06,"d":"9.27E-06"},7.77158034528553]
["Protein processing in endoplasmic reticulum","ko04141","26 out of 251 10.3585657370518%","398 out of 9044 4.40070765148165%",{"v":4.09673503749541e-05,"d":"4.10E-05"},0.00352319213224606,2.35384091773609]
["Ribosome biogenesis in eukaryotes","ko03008","14 out of 251 5.57768924302789%","170 out of 9044 1.8796992481203%",0.000263662946564103,0.0226750134045128,2.96733067729084]
["Phenylpropanoid biosynthesis","ko00940","21 out of 251 8.36653386454183%","328 out of 9044 3.62671384343211%",0.000304058821921749,0.0261490586852704,2.30691866679623]
["Glycine, serine and threonine metabolism","ko00260","11 out of 251 4.38247011952191%","139 out of 9044 1.53693056169836%",0.00164715905967361,0.14165567913193,2.85144314827023]
["Anthocyanin biosynthesis","ko00942","2 out of 251 0.796812749003984%","3 out of 9044 0.033171163202123%",0.0022595122032189,0.194318049476825,24.0212483399734]
["Amino sugar and nucleotide sugar metabolism","ko00520","15 out of 251 5.97609561752988%","278 out of 9044 3.07386112339673%",0.0105593400796378,0.908103246848848,1.94416578291152]
["Monoterpenoid biosynthesis","ko00902","1 out of 251 0.398406374501992%","7 out of 9044 0.0773993808049536%",0.178879610241627,1,5.14741035856574]
["Indole alkaloid biosynthesis","ko00901","1 out of 251 0.398406374501992%","7 out of 9044 0.0773993808049536%",0.178879610241627,1,5.14741035856574]
["Lipoic acid metabolism","ko00785","1 out of 251 0.398406374501992%","7 out of 9044 0.0773993808049536%",0.178879610241627,1,5.14741035856574]
["Arachidonic acid metabolism","ko00590","3 out of 251 1.19521912350598%","32 out of 9044 0.353825740822645%",0.0580288244840316,1,3.37798804780876]
["Glycosaminoglycan degradation","ko00531","1 out of 251 0.398406374501992%","11 out of 9044 0.121627598407784%",0.266388275654728,1,3.27562477363274]
["Phenylalanine metabolism","ko00360","7 out of 251 2.78884462151394%","91 out of 9044 1.0061919504644%",0.0130598550532439,1,2.77168250076617]
["Cutin, suberine and wax biosynthesis","ko00073","4 out of 251 1.59362549800797%","59 out of 9044 0.652366209641751%",0.0806701488290467,1,2.44283881423459]
["Stilbenoid, diarylheptanoid and gingerol biosynthesis","ko00945","6 out of 251 2.39043824701195%","91 out of 9044 1.0061919504644%",0.0405380429584545,1,2.37572785779957]
["Circadian rhythm - plant","ko04712","5 out of 251 1.99203187250996%","78 out of 9044 0.862450243255197%",0.0651889836129854,1,2.30973541730514]
["Cyanoamino acid metabolism","ko00460","7 out of 251 2.78884462151394%","112 out of 9044 1.23839009287926%",0.0360319342487582,1,2.25199203187251]
["Ascorbate and aldarate metabolism","ko00053","4 out of 251 1.59362549800797%","65 out of 9044 0.718708536045997%",0.105900396538195,1,2.21734600061293]
["Glutathione metabolism","ko00480","10 out of 251 3.98406374501992%","164 out of 9044 1.81335692171605%",0.0158960252468755,1,2.19706539694879]
["Glyoxylate and dicarboxylate metabolism","ko00630","9 out of 251 3.58565737051793%","153 out of 9044 1.69172932330827%",0.0265273597168705,1,2.1195219123506]
["Nitrogen metabolism","ko00910","5 out of 251 1.99203187250996%","87 out of 9044 0.961963732861566%",0.0938784010896715,1,2.07079727068737]
["Galactose metabolism","ko00052","5 out of 251 1.99203187250996%","97 out of 9044 1.07253427686864%",0.132090994385063,1,1.85731301597733]
["Tyrosine metabolism","ko00350","4 out of 251 1.59362549800797%","79 out of 9044 0.873507297655905%",0.176191709319341,1,1.82439860809925]
["Alanine, aspartate and glutamate metabolism","ko00250","5 out of 251 1.99203187250996%","102 out of 9044 1.12781954887218%",0.153457511793066,1,1.76626826029216]
["Ubiquinone and other terpenoid-quinone biosynthesis","ko00130","4 out of 251 1.59362549800797%","82 out of 9044 0.906678460858027%",0.19295854040296,1,1.75765231755903]
["Sesquiterpenoid and triterpenoid biosynthesis","ko00909","2 out of 251 0.796812749003984%","41 out of 9044 0.453339230429014%",0.315598256138415,1,1.75765231755903]
["Linoleic acid metabolism","ko00591","1 out of 251 0.398406374501992%","21 out of 9044 0.232198142414861%",0.446626180787496,1,1.71580345285525]
["Carbon metabolism","ko01200","23 out of 251 9.16334661354582%","520 out of 9044 5.74966828836798%",0.0178760601763659,1,1.59371743794055]
["Glucosinolate biosynthesis","ko00966","1 out of 251 0.398406374501992%","23 out of 9044 0.254312251216276%",0.476986905632152,1,1.56660315260696]
["Starch and sucrose metabolism","ko00500","18 out of 251 7.17131474103586%","421 out of 9044 4.65501990269792%",0.0450866625361602,1,1.5405551191907]
["Carbon fixation in photosynthetic organisms","ko00710","6 out of 251 2.39043824701195%","141 out of 9044 1.55904467049978%",0.197739751881905,1,1.5332711706366]
["Isoquinoline alkaloid biosynthesis","ko00950","2 out of 251 0.796812749003984%","48 out of 9044 0.530738611233967%",0.386450261957396,1,1.50132802124834]
["Purine metabolism","ko00230","12 out of 251 4.7808764940239%","290 out of 9044 3.20654577620522%",0.108840001274391,1,1.4909740348949]
["Fructose and mannose metabolism","ko00051","5 out of 251 1.99203187250996%","121 out of 9044 1.33790358248563%",0.245532243632276,1,1.48892035165125]
["Tropane, piperidine and pyridine alkaloid biosynthesis","ko00960","3 out of 251 1.19521912350598%","73 out of 9044 0.807164971251659%",0.330434965984784,1,1.48076188397097]
["Diterpenoid biosynthesis","ko00904","2 out of 251 0.796812749003984%","50 out of 9044 0.552852720035383%",0.406135099791752,1,1.44127490039841]
["Arginine and proline metabolism","ko00330","4 out of 251 1.59362549800797%","103 out of 9044 1.13887660327289%",0.320434920654323,1,1.39929601980428]
["Vitamin B6 metabolism","ko00750","1 out of 251 0.398406374501992%","26 out of 9044 0.287483414418399%",0.519444934510752,1,1.38584125038308]
["Steroid biosynthesis","ko00100","3 out of 251 1.19521912350598%","79 out of 9044 0.873507297655905%",0.376186817355332,1,1.36829895607444]
["Glycolysis / Gluconeogenesis","ko00010","9 out of 251 3.58565737051793%","238 out of 9044 2.63157894736842%",0.216330502027586,1,1.36254980079681]
["Spliceosome","ko03040","13 out of 251 5.1792828685259%","353 out of 9044 3.9031402034498%",0.1826776788735,1,1.32695281198154]
["Fatty acid elongation","ko00062","2 out of 251 0.796812749003984%","55 out of 9044 0.608137992038921%",0.453948126363357,1,1.3102499094531]
["alpha-Linolenic acid metabolism","ko00592","3 out of 251 1.19521912350598%","83 out of 9044 0.917735515258735%",0.406359042197356,1,1.3023568377094]
["Endocytosis","ko04144","11 out of 251 4.38247011952191%","310 out of 9044 3.42768686421937%",0.243088868951812,1,1.27855031486955]
["Peroxisome","ko04146","6 out of 251 2.39043824701195%","171 out of 9044 1.89075630252101%",0.338410740371339,1,1.26427622841965]
["Biosynthesis of amino acids","ko01230","17 out of 251 6.77290836653386%","489 out of 9044 5.40689960194604%",0.199785691593994,1,1.25264178459984]
["Carotenoid biosynthesis","ko00906","2 out of 251 0.796812749003984%","59 out of 9044 0.652366209641751%",0.49057961983478,1,1.22141940711729]
["Glycerolipid metabolism","ko00561","4 out of 251 1.59362549800797%","118 out of 9044 1.3047324192835%",0.415317781552839,1,1.22141940711729]
["Zeatin biosynthesis","ko00908","1 out of 251 0.398406374501992%","30 out of 9044 0.33171163202123%",0.570762173674745,1,1.20106241699867]
["Pentose and glucuronate interconversions","ko00040","6 out of 251 2.39043824701195%","189 out of 9044 2.08978328173375%",0.42800554691843,1,1.14386896857016]
["Folate biosynthesis","ko00790","1 out of 251 0.398406374501992%","32 out of 9044 0.353825740822645%",0.594335389108253,1,1.12599601593625]
["RNA degradation","ko03018","7 out of 251 2.78884462151394%","226 out of 9044 2.49889429455993%",0.438437131910155,1,1.11603144942354]
["Phenylalanine, tyrosine and tryptophan biosynthesis","ko00400","3 out of 251 1.19521912350598%","97 out of 9044 1.07253427686864%",0.507712540435666,1,1.1143878095864]
["Arginine biosynthesis","ko00220","2 out of 251 0.796812749003984%","68 out of 9044 0.75187969924812%",0.567119144605638,1,1.0597609561753]
["Selenocompound metabolism","ko00450","1 out of 251 0.398406374501992%","35 out of 9044 0.386996904024768%",0.627299074008533,1,1.02948207171315]
["Taurine and hypotaurine metabolism","ko00430","1 out of 251 0.398406374501992%","35 out of 9044 0.386996904024768%",0.627299074008533,1,1.02948207171315]
["Pentose phosphate pathway","ko00030","3 out of 251 1.19521912350598%","108 out of 9044 1.19416187527643%",0.580689912820063,1,1.00088534749889]
["Plant-pathogen interaction","ko04626","9 out of 251 3.58565737051793%","338 out of 9044 3.73728438743919%",0.599061074912666,1,0.959428557957519]
["Histidine metabolism","ko00340","1 out of 251 0.398406374501992%","38 out of 9044 0.420168067226891%",0.657593982789196,1,0.948207171314741]
["Sulfur metabolism","ko00920","2 out of 251 0.796812749003984%","77 out of 9044 0.851393188854489%",0.635051998721888,1,0.935892792466498]
["RNA polymerase","ko03020","2 out of 251 0.796812749003984%","81 out of 9044 0.89562140645732%",0.662465143858718,1,0.889675864443461]
["Cysteine and methionine metabolism","ko00270","5 out of 251 1.99203187250996%","203 out of 9044 2.24458204334365%",0.66918518102453,1,0.8874845445803]
["Glycerophospholipid metabolism","ko00564","4 out of 251 1.59362549800797%","168 out of 9044 1.85758513931889%",0.690585096811182,1,0.857901726427623]
["Fatty acid degradation","ko00071","2 out of 251 0.796812749003984%","88 out of 9044 0.973020787262273%",0.70643835135149,1,0.818906193408185]
["Plant hormone signal transduction","ko04075","13 out of 251 5.1792828685259%","585 out of 9044 6.46837682441398%",0.834435574108588,1,0.800708277999115]
["Valine, leucine and isoleucine degradation","ko00280","2 out of 251 0.796812749003984%","92 out of 9044 1.0172490048651%",0.729362273170704,1,0.783301576303482]
["Ether lipid metabolism","ko00565","1 out of 251 0.398406374501992%","47 out of 9044 0.51968155683326%",0.734533663885271,1,0.766635585318301]
["Terpenoid backbone biosynthesis","ko00900","2 out of 251 0.796812749003984%","97 out of 9044 1.07253427686864%",0.755872409041083,1,0.742925206390931]
["Tryptophan metabolism","ko00380","2 out of 251 0.796812749003984%","97 out of 9044 1.07253427686864%",0.755872409041083,1,0.742925206390931]
["Valine, leucine and isoleucine biosynthesis","ko00290","1 out of 251 0.398406374501992%","50 out of 9044 0.552852720035383%",0.756140007165356,1,0.720637450199203]
["Biosynthesis of unsaturated fatty acids","ko01040","1 out of 251 0.398406374501992%","54 out of 9044 0.597080937638213%",0.782247766856208,1,0.667256898332595]
["Lysine degradation","ko00310","1 out of 251 0.398406374501992%","58 out of 9044 0.641309155241044%",0.805570356092195,1,0.62123918120621]
["Aminoacyl-tRNA biosynthesis","ko00970","2 out of 251 0.796812749003984%","123 out of 9044 1.36001769128704%",0.860317068204057,1,0.585884105853011]
["Inositol phosphate metabolism","ko00562","2 out of 251 0.796812749003984%","130 out of 9044 1.43741707209199%",0.880460967697474,1,0.554336500153233]
["2-Oxocarboxylic acid metabolism","ko01210","2 out of 251 0.796812749003984%","146 out of 9044 1.61432994250332%",0.9168566380332,1,0.493587294656988]
["Limonene and pinene degradation","ko00903","1 out of 251 0.398406374501992%","78 out of 9044 0.862450243255197%",0.889737425419026,1,0.461947083461028]
["Ubiquitin mediated proteolysis","ko04120","3 out of 251 1.19521912350598%","254 out of 9044 2.80849181777974%",0.974417903181874,1,0.425573297361734]
["Oxidative phosphorylation","ko00190","3 out of 251 1.19521912350598%","257 out of 9044 2.84166298098187%",0.976048282576737,1,0.420605515680469]
["Phagosome","ko04145","2 out of 251 0.796812749003984%","189 out of 9044 2.08978328173375%",0.969881120007561,1,0.381289656190055]
["Photosynthesis","ko00195","1 out of 251 0.398406374501992%","100 out of 9044 1.10570544007077%",0.941004919330298,1,0.360318725099602]
["Ribosome","ko03010","6 out of 251 2.39043824701195%","651 out of 9044 7.19814241486068%",0.99981587511323,1,0.332090990875209]
["Pyrimidine metabolism","ko00240","2 out of 251 0.796812749003984%","228 out of 9044 2.52100840336134%",0.988455714114291,1,0.316069057104914]
["mRNA surveillance pathway","ko03015","2 out of 251 0.796812749003984%","269 out of 9044 2.97434763379036%",0.995909003018686,1,0.267894962899332]
["Fatty acid metabolism","ko01212","1 out of 251 0.398406374501992%","138 out of 9044 1.52587350729766%",0.980044291319238,1,0.261100525434494]
["Pyruvate metabolism","ko00620","1 out of 251 0.398406374501992%","169 out of 9044 1.86864219371959%",0.991786583373523,1,0.213206346212782]
["RNA transport","ko03013","2 out of 251 0.796812749003984%","338 out of 9044 3.73728438743919%",0.999322271114259,1,0.213206346212782]